Note: Descriptions are shown in the official language in which they were submitted.
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ANTIMICROBIAL COMPOSITIONS AND USES THEREOF
The present invention relates to antimicrobial compositions, and more
particularly to
antimicrobial compositions having bactericidal activity, uses and methods
thereof.
Emerging infectious diseases are becoming more devastating even in developed
countries where sanitary conditions are often very rigorous. These diseases
are now
not only a major threat to the population but also a great challenge for the
health
sector authorities. The large diversity of source contamination, the emergence
and
rapid spread of multidrug resistant microorganisms as well as the involvement
of
many transmission vectors of these pathogens are important factors that cause
these diseases to spread quickly before effective control measures can be
implemented.
One of the strategies used to reduce the impact of these emerging diseases is
the
development of programs to stop the transmission cycle of pathogenic
microorganisms in different target areas. Thus various programs of cleaning
and
disinfection in health as well as in food industries have been recently
implemented.
To prevent or slow the spread of microorganisms in health and food industries,
a wide
variety of products such as antimicrobial soap, spray, liquid, liquid surface
and wipes
have been developed.
Bacteriocins and organic acids have been used to control the growth of
microorganisms mostly in food. Bacteriocins are low-molecular-weight proteins
which inhibit the growth of similar or closely related bacterial strain(s)
(Ennahar,
2000). A data base comprising most of the well characterized bacteriocins as
well as
their respective characteristics has recently been developed by Hammami et al.
2009. One of the most studied bacteriocin is Nisin which is the only
bacteriocin
generally recognized as safe (GRAS) by the American Food and Drug
Administration. It is currently used as additive/preservative in different
food matrices
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such as in milk (Benech et al. 2002) meat based products (Abee et al. 1995,
Cutter,
2001), marine products (Nilsson et al. 2002) and plant products (Allende et
al. 2007).
US patent 5,573,800 relates to an antimicrobial product comprising a
pediococcus-
derived bacteriocin or synthetic equivalent antimicrobial agent in combination
with a
chelating agent reported as having anti - Listeria monocytogenes activity and
used as a
food preservative.
EP application 2 289 350 relates to dough compositions containing natural
antimicrobial
agent to preserve the dough. The latter can contain both encapsulated organic
and
natural antimicrobial agent.
WO 2005/104878 relates to an antimicrobial composition comprising an
antimicrobial
material, an organic acid and an emulsifier.
The present description relates to compositions, uses and methods thereof.
In one aspect the composition is:
a) a composition comprising at least two organic acids selected from the
group consisting of lactic acid, acetic acid, benzoic acid and citric acid;
b) a composition comprising at least two bacteriocin selected from the group
consisting of pediocin, Nisin and reuterin;
c) a composition comprising pediocin and at least two organic acids selected
from the group consisting of lactic acid, acetic acid, benzoic acid and citric
acid; or
d) a composition comprising reuterin and at least one organic acid selected
from the group consisting of lactic acid, acetic acid, benzoic acid and citric
acid.
In one aspect, the compositions have synergistic activity.
In one aspect, the compositions are stable.
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In one aspect, the compositions have an antimicrobial activity against Gram-
positive
and Gram-negative bacteria.
In one aspect, there is provided a use of the antimicrobial composition as
defined
herein for sanitizing and/or disinfecting a surface.
In one aspect, there is provided a cellulosic substrate comprising the
antimicrobial
composition as defined herein.
In one aspect, there is provided a use of the cellulosic substrate as defined
herein
for sanitizing and/or disinfecting a surface.
In one aspect, there is provided a food packaging comprising the antimicrobial
composition as defined herein.
In one aspect, there is provided a use of the food packaging as defined herein
as an
active food packaging.
In one aspect, there is provided a method for sanitizing and/or disinfecting a
surface,
comprising applying an effective antimicrobial amount of the antimicrobial
composition as defined herein to the surface.
Fig. 1: Inhibition activity of Mix II against E. coli ATCC 11229 (A) and
Listeria. ivanovii
HPB28 (B) determined by the microplate microdilution method;
Fig. 2: Inhibition activity of Mix I against E. coli ATCC 11229 (A) and
Listeria ivanovii
HPB28 (B) determined by the microplate microdilution method;
Fig. 3: Log reduction of E. coli ATCC 11229 obtained with Mix I (A) and 11(B)
after
different contact time using the AOC 960.0 method;
Fig. 4: Log reduction of S. aureus ATCC 6538 obtained with Mix I (A) and 11(B)
after
different contact time using the AOC 960.0 method;
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Fig. 5: Inhibition activity against E. coli ATCC 11229 of towel paper soaked
in Mix I and
II determined by the agar diffusion test;
Fig. 6: Inhibition activity against Listeria ivanovii HPB of towel paper
soaked in Mix I and
11(A) and Mix 11(B) determined by the agar diffusion test;
Fig. 7: Inhibition activity against E. coli ATCC 11229 of Mix I (A) and 11(B)
determined
by the microplate microdilution method;
Fig. 8: Inhibition activity against Listeria ivanovii HPB28 of Mix I (A) and
11(B)
determined by the microplate microdilution method;
Fig. 9. Interaction between citric acid and pediocin on Listeria. (FIC index);
Fig. 10. Interaction between lactic acid and pediocin on Listeria. (FIC
index);
Fig. 11. Interaction between reuterin and citric acid on Listeria. (FIC
index);
Fig. 12. Interaction between reuterin and lactic acid on Listeria. (FIC
index);
Fig. 13. Interaction between reuterin and pediocin on Listeria. (FIC index);
and
Fig.14. Interaction between reuterin and nisin Z on Listeria (FIC index).
In one aspect, the compositions have a synergistic antimicrobial activity. In
a further
aspect, the compositions have a large-spectrum antimicrobial activity. In a
further
aspect, the compositions have a synergistic large-spectrum of antimicrobial
activity.
In a further aspect, the compositions could be used on a wide variety of
surfaces. In
a further aspect, the compositions could be used for sanitation and/or
disinfection of
surfaces. In one aspect the compositions could be used without any rinsing
step.
The term "synergistic" as used herein refers to the effect obtained by
combining
compounds and/or agent which is greater than the effect obtained by the
separate
addition of each compound. Methods for determining the potential synergistic
effect
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of combinations are known. Synergistic activity could be determined using the
Fractional Inhibitory Concentration (FIC) index by the broth microdilution
method.
According to this method, a combination having a FIC index < 0.5 is considered
as
synergistic, a combination having 0.5 < FIC index
1 is considered as moderate
synergistic, a combination having a 1.0 < FIC index 4.0 is considered as
indifferent
and a combination having a FIC index > 4 is considered an antagonist. In one
aspect, the compositions have a moderate or a high synergic effect as
determined
by the FIC method. In a further aspect, the compounds could be combined at
lower
than their MICs. In one aspect, the compositions having a synergistic effect
allow the
use of lower concentration of each compound or agent.
The expression "percentage by weight or volume" refers to the mass or the
volume
of one substance relative to the mass or the volume of the total mixture mass
or
mixture volume. These amounts are calculated assuming equal weight for equal
volumes.
The term "AU/ml" refers to arbitrary units per ml. Methods for evaluating the
AU/ml of
bacteriocins are known such as described in Turcotte et al. 2004.
The terms "antimicrobial composition" or "antimicrobial activity" as used
herein refer
to inhibition and/or reduction of the growth of microorganisms including
multicellular,
unicellular or acellular organisms such as bacteria, fungi, yeast, mold,
archea,
protists, virus, algae, plankton and planarian. Methods for evaluating the
antimicrobial activity of a composition are known such as agar diffusion test,
agar
and broth dilution methods, Stokes method, E-test. The activity can also be
measured by calculating the log reduction in number of microorganisms.
In one aspect, the compositions have antimicrobial activity against gram
positive and
gram negative bacteria. In a further aspect, the compositions have synergistic
activity against gram positive and gram negative bacteria.
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The compositions as described herein could be used for sanitizing and/or
disinfecting surfaces. The terms "sanitation" or "sanitizing" refer to a 1 to
3-log
reduction in number of microorganisms on the surfaces to be treated. In one
embodiment, the term "sanitation" refers to a 3-log reduction in number of
microorganisms on the surfaces to be treated. The term "disinfectant" refers
to a 3 to
5-log reduction in number of microorganisms on the surfaces to be treated. In
one
embodiment, the term "disinfecting" refers to a 5-log reduction in number of
microorganisms on the surfaces to be treated. Methods for determination of log
reduction in number of microorganism are well known such as the film contact
method, or the AOAC 960.09 method (AOAC Official Methods of Analysis (2000),
Disinfectants, chapter 6, p.10).
The expression "Gram-positive" refers to bacteria that are stained dark blue
or violet
by Gram staining as opposed to Gram-negative bacteria which can not retain the
violet stain. Gram-positive bacteria are able to retain the crystal violet
strain because
of the high amount of peptidoglycan in their cell wall. Gram-positive cell
wall typically
lack the outer membrane found in Gram-negative bacteria. Gram-positive
bacteria
are known such as Enterococcus faecium, Staphylococcus aureus, Listeria
monocyto genes Scott 3, Corynebacterium, Streptococcus M3, Streptococcus
agalactiae, Streptococcus sp, Clostridium difficile and so on.
The expression "Gram-negative" refers to bacteria that do not retain the
crystal violet
dye in the Gram staining protocol. In the Gram stain test, a couterstain is
added after
the crystal violet coloring the Gram-negative bacteria with a red or pink
color. Gram-
negative bacteria are known such as Aeromonas, Escherichia coli 0157:H7,
Escheria coli, Pseudomonas fluorescens, Serratia marcescens, Salmonella sp,
Pseudomonas aeroginosa, Aeromonas Hydrophila, Pseudomonas euroginosa,
Erwinia, Yersinia enterocolitica and so on.
The expression "organic acid" refers to an organic compound with acidic
properties.
The most common organic acids are the carboxylic acids whose activity is
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associated with their carboxyl group-COOH such as lactic acid, acetic acid and
citric
acid. Several organic acids are naturally produced by strains of lactic acid
bacteria
such as those belonging to the genus lactococcus, lactobacillus and
pediococcus.
The term "citric acid" refers to a weak organic acid (C2H402) that could exist
in an
anhydrous or as a monohydrate form. This term also refers to the conjugate
base of
citric acid (C2H60(C00)33-) or to the esters of citric acid. Citric acid could
be
produced by culturing bacteria such as A. niger fed on a sucrose or glucose-
containing medium. As such, citric acid, the conjugate base and the esters
could be
purchased.
The term "lactic acid" refers to a carboxylic acid (C3H603) having a hydroxyl
group
adjacent to the carboxyl group, making it an alpha hydroxyl acid (AHA). This
term
also refers to the conjugate base of lactic acid or to the esters of lactic
acid. Lactic
acid could be obtained by lactic acid fermentation performed by lactic acid
bacteria.
Lactic acid, the conjugate base and the esters could be purchased.
The term "benzoic acid" refers to an organic acid (C7H602), to its conjugate
base or
to its acid known as benzoates. Benzoic acid could be produced commercially.
The term "bacteriocin" as used herein refers to proteinaceous toxins of low
molecular
weight that could be produced by bacteria such as Lactic acid bacteria to
inhibit the
growth of similar or closely related bacterial strain(s). Bacteriocins could
typically be
isolated from a broth into which bacteria have grown or they could be
chemically
synthesized.
The term "pediocin" includes class ha or pediocin-like bacteriocins that could
be
produced by lactic acid bacteria. Class II bacteriocins are a class of small
peptides
that inhibits the growth of various bacteria. Lactic acid bacteria such as
Pediococcus
acidilactici, Pediococcus parvulus and Lactobacillus plantarum secrete
pediocin PA-
1, AcH or SJ-1 which kill target cells by permeabilizing the cell membrane
(Ennahar
S. et al. Class ha bacteriocins: biosynthesis, structure and activity. FEMS
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Microbiology Reviews, 24, 2000, p. 85-100). The nucleic acid sequences as well
as
the amino acid sequences of pediocin PA-1, AcH and SJ-1 are known. (Gene bank,
Nucleic Acids Research, 2011 Jan 39 (database issue) D32-7). In a further
embodiment, the compositions described herein comprise pediocin PA-1. Pediocin
could be isolated from a bacteria culture broth such as Pediococcus
acidilactici
culture grown in MRS broth overnight or could be chemically synthesised.
Pediocin
bacteriocin activity could be assayed by agar diffusion test.
The term "Nisin" includes a lanthione-containing bacteriocin having a
polycyclic
peptide with 34 amino acid residues. In one aspect, the Nisin contains the
amino
acids lanthionine, methyllanthionine, dehydroalanine and dehydro-amino-butyric
acid. Nisin could be obtained by fermentation using bacterium Lactococcus
lactis.
Nisin could also be chemically synthesized. Nisin is also available
commercially. In
one embodiment, Nisin is Nisn A or Nisin Z. Nisin having a histidine at
position 27 is
referred as "Nisin A" and Nisin having an asparagine at position 27 is
referred as
"Nisin Z". The nucleic acid sequences as well as the amino acid sequences of
Nisin,
Nisin A and Nisin Z are known.
In one embodiment, Nisin, Nisin A and Nisin Z include a nucleic acid or an
amino
acid sequence at least 65% to 95% identical, at least 65%, 70%, 75%, 80%, 85%,
90% identical or at least 95% identical to part or all of the nucleic acid or
amino acid
sequence of Nisin, Nisin A or Nisin Z, respectively.
In one embodiment, pediocin includes a nucleic acid or an amino acid sequence
at
least 65% to 95% identical, at least 65%, 70%, 75%, 80%, 85%, 90% identical or
at
least 95% identical to part or all of the nucleic acid or amino acid sequence
of
pediocin PA-1, AcH or SJ-1.
Techniques for determining nucleic acid and amino acid "sequence identity" are
also
known in the art. Typically, such techniques include determining the
nucleotide
sequence of the mRNA for a gene and/or determining the amino acid sequence
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encoded thereby, and comparing these sequences to a second nucleotide or amino
acid sequence. In general, "identity" refers to an exact nucleotide-to-
nucleotide or
amino acid-to-amino acid correspondence of two polynucleotides or polypeptide
sequences, respectively. Two or more sequences (polynucleotide or amino acid)
could be compared by determining their "percent identity." The percent
identity of
two sequences, whether nucleic acid or amino acid sequences, is the number of
exact matches between two aligned sequences divided by the length of the
shorter
sequences and multiplied by 100. An approximate alignment for nucleic acid
sequences is provided by the local homology algorithm of Smith and Waterman,
Advances in Applied Mathematics 2:482-489 (1981). This algorithm could be
applied
to amino acid sequences by using the scoring matrix developed by Dayhoff,
Atlas of
Protein Sequences and Structure, M. 0. Dayhoff ed., 5 suppl. 3:353-358,
National
Biomedical Research Foundation, Washington, D.C., USA, and normalized by
Gribskov, Nucl. Acids Res. 14(6):6745-6763 (1986). An exemplary implementation
of
this algorithm to determine percent identity of a sequence is provided by the
Genetics Computer Group (Madison, Wis.) in the "BestFit" utility application.
The
default parameters for this method are described in the Wisconsin Sequence
Analysis Package Program Manual, Version 8 (1995) (available from Genetics
Computer Group, Madison, Wis.). Another method of establishing percent
identity
which could be used in the context of the present description is the MPSRCH
package of programs copyrighted by the University of Edinburgh, developed by
John
F. Collins and Shane S. Sturrok, and distributed by IntelliGenetics, Inc.
(Mountain
View, Calif.). From this suite of packages the Smith-Waterman algorithm could
be
employed where default parameters are used for the scoring table (for example,
gap
open penalty of 12, gap extension penalty of one, and a gap of six). From the
data
generated the "Match" value reflects "sequence identity." Other suitable
programs
for calculating the percent identity between sequences are generally known in
the
art, for example, another alignment program is BLAST, used with default
parameters. For example, BLASTN and BLASTP could be used using the following
default parameters: genetic code=standard; filter=none; strand=both;
cutoff=60;
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expect=10; Matrix BLOSUM62; Descriptions=50 sequences; sort by=HIGH SCORE;
Databases=non-redundant, GenBank+EMBL+DDBJ+PDB+GenBank
CDS
translations+Swiss protein+Spupdate+P IR.
The term "reuterin" includes a multi-compound that could be produced by
Lactobacillus reuteri during the metabolism of glycerol to 1,3-propanediol.
Reuterin
typically consists of 3-hydroxypropionaldehyde and is in a dimer form in
dynamic
equilibrium. Without being bound to a specific theory, the mechanism of action
of
reuterin could involve a competition with ribonucleotides for binding to the
ribose
recognition site of ribonucleotide reductase which is the first enzyme
involved in
10 DNA synthesis. Reuterin seems to inhibit the conversion of
ribonucleotides into
deoxyribonucleotides and hence exert its antimicrobial effect (Vollenweider S,
Lacroix C: Appl Microbiol Biotechnol 2004).
Reuterin could be chemically synthesized. In one aspect, reuterin could also
be
isolated from bacteria culture broth. In one aspect, reuterin could be
extracted from
Lactobacillus reuteri ATCC 53608 culture grown in MRS broth overnight.
Reuterin
bacteriocin activity could be assayed by the agar diffusion test described
herein.
The term "about" is intended to represent a variation of 10 (:)/0 of the
values
provided herein.
In one aspect, there is provided a cellulosic substrate comprising the
compositions
as defined herein. The expression "cellulosic substrate" refers to a thin
material
produced by pressing together moist fibers, typically cellulose pulp derived
from
wood, rags or grasses and drying into flexible sheets. The cellulosic
substrate could
also be produced from recycled material such as recycled paper. Examples of
cellulosic substrate are hygienic paper, facial paper, cardboard, paper
towels,
wrapping paper, toilet paper or table napkin, moulded pulp and the like.
The antimicrobial activity of the compositions as described herein on a
cellulosic
substrate could be determined by soaking the cellulosic substrate in the
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compositions to be tested and plating the cellulosic substrate on agar. An
agar
diffusion test could then be performed.
The compositions could therefore be applied on a cellulosic substrate prior to
sanitizing and/or disinfecting surfaces. The cellulosic substrate soaked with
the
compositions could be used for sanitizing and/or disinfecting surfaces.
The term "surface" refers to the outer of the topmost boundary of an object to
be
treated. In one embodiment, the surface to be treated could be located in
health care
facilities, food plants, spas, exercise facilities and the like. In one
embodiment, the
surface to be treated is food, food packaging, counter top, desk, floor, wall,
sauna,
pool, and the like. The term "surface" may also comprise a body parts such as
hands, feet, arms, legs and the like. The compositions as described herein
could be
used for sanitizing and/or disinfecting the surface as described above, thus
reducing
the number of microorganisms on said surface. For instance, the compositions
as
described herein could be used to sanitizing and/or disinfecting kitchen
countertop
on which food is manipulated. The compositions as described herein could also
be
used to sanitizing and/or disinfecting food packaging. The compositions as
described
herein could also be used for sanitizing and/or disinfecting hands. In one
aspect, the
compositions could be used without rinsing step. In a further aspect, the
compositions could be used safely on various surfaces as well as on food.
In another embodiment, the food packaging could comprise the antimicrobial
composition described herein. In one embodiment, the antimicrobial composition
described herein is applied, coated, vaporized or immobilized on the food
packaging.
In one embodiment, the food packaging comprising the antimicrobial composition
described herein is an active food packaging. The active food packaging
comprising
the antimicrobial composition described herein could inhibit and/or reduce the
growth
of microorganisms and as such be used to maintain and/or enhance food quality,
food sensory properties, food safety and/or food shelf-life.
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The term "objects" refers to something material that may be perceived by the
senses
such as toy, dishes, telephone and the like. As such, the compositions could
be used
to sanitize and/or disinfect any objects.
The term "food" refers to a material usually from a plant or animal origin
that contains
or consists of essential body nutrients produced for animal or human
consumption.
Examples of food that could be sanitized and/or disinfected with the
compositions
described herein are fruits, vegetables, meat, and fishes. In one aspect, the
compositions could be safely used on food.
The expression "body part" refers to any part of a human or an animal that is
part of
the body, such as hands, face, feet, arms, legs, neck, head or torso. The
compositions as described herein could be used as hands sanitizer in order to
sanitized and/or disinfected hands.
The expression "food plant" refers to a location where food is processed,
packed, or
shipped. The surfaces of the food plant such as counter tops, wall, floor
could thus
be sanitized and/or disinfected with the compositions as described herein.
The expression "food packaging" refers to a material used for packing food. In
one
embodiment, the food packaging could be a film, resin, liner, absorbent pad,
plastic,
shrink bag, shrink wrap, plastic wrap, Styrofoam, carton, cellulosic substrate
and the
like.
In one aspect, the compositions as described herein are stable e.g. their
activity
does not significantly decrease over a predetermined period of time. In one
aspect,
the shelf life of these compositions is stable for the intended use. In
another aspect,
this synergistic activity is stable for several days at both 4 and 25t. In a
further
aspect, the synergistic activity is stable for 60 days.
In another aspect there is provided, a method for sanitizing and/or
disinfecting a
surface. The method comprises applying an effective antimicrobial amount of
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antimicrobial composition as defined herein to the surface. The expression
"effective
antimicrobial amount" refers to an amount of the antimicrobial composition
applied to
the surface sufficient to obtain at least 1-log reduction in number of
microorganisms
on the surface.
The compositions as described herein may further comprise surfactants. The
term
"surfactant" refers to a type of molecule which has both hydrophobic and
hydrophilic
portions, which allows it to stabilize and disperse hydrophobic molecules and
aggregates of hydrophobic molecules in aqueous systems. As such, the
surfactant is
capable of dispersing components of the compositions as described herein in an
aqueous solution. Suitable surfactant could be monoglycerides, diglycerides,
sucrose or fatty acid esters.
The compositions as described herein could also include stabilizing agents,
wetting
agents, as well as pigments or dyes among any number of constituents which
could
be added to the compositions without substantially affecting the antimicrobial
activity
or the stability of the compositions. Stabilizing agents refer to chemical
that inhibits
separation of suspensions, emulsions and foams. Wetting agents increase the
spreading and penetrating properties of a liquid by lowering its surface
tension.
Pigments or dyes change the color of reflected or transmitted light as the
result of
wavelength-selective absorption. Suitable agents, dyes or pigments that could
be
added without affecting the antimicrobial activity or the stability of the
compositions
described herein are known.
The compositions described herein could be in form of gel, foam, ointment,
liquid,
spray or powder. The term "gel" refers to a solid, jelly-like material that
could have
properties ranging from soft and weak to hard and tough. A gel is a
substantially
dilute cross-linked system, which exhibits no flow when in the steady-state.
The term "foam" refers to a substance that is formed by trapping pockets of
gas in a
liquid or a solid.
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The term "ointment" refers to a homogenous, viscous, semi-solid preparation
with a
high viscosity that could be intended for external application such as to the
skin or
mucous membranes.
The term "liquid" refers to the composition having a definite volume but not a
fixed
shape. As such, acids, pediocin and reuterin could be solubilised or diluted
in a liquid
such as water and form a liquid.
The term "spray" refers to a dynamic collection of drops dispersed in a gas.
The
process of forming a spray is known as atomization. The compositions as
described
herein could thus be in a form of a spray.
The term "powder" refers to a dry, bulk solid composed of a large number of
fine
particles that may flow freely when shaken or tilted. The compositions
described
herein in form of powder could be solubilised in a liquid such as water before
being
used.
As shown at tables 1 and 2 a composition comprising citric acid and lactic
acid has a
FIC index of 0.75 on both E. coli ATCC 11229 and Listeria ivanovii HPB28
demonstrating a synergistic effect on both Gram-positive and Gram-negative
bacteria. As also shown at tables 1 and 2 a composition comprising reuterin
and
pediocin have a FIC index of 0.75 on both E. Co/i ATCC 11229 and Listeria
ivanovii
HPB28 demonstrating a synergistic effect on both Gram-positive and Gram-
negative
bacteria. Furthermore, tables 1 and 2 show that either lactic acid or citric
acid in
combination with either pediocin or reuterin has a synergistic effect (FIC
index 1)
on both E. Co/i ATCC 11229 and Listeria ivanovii HPB28 demonstrating a
synergistic effect on both Gram-positive and Gram-negative bacteria.
As further demonstrated at figures 1A and 1B, lactic acid, citric acid and
reuterin
taken separately do not reduce the growth of E.Coli ATCC 11229 or Listeria
ivanovii
HPB28 as efficiently as when lactic acid, citric acid and reuterin are
combined (Mix
II). As shown at figure 2A, Mix I comprising citric acid (1%), lactic acid
(1%) and
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pediocin inhibits the growth of E. co/i. Figure 2B shows that lactic acid
(0.125%),
citric acid (0.0625%) and pediocin taken separately do not reduce the growth
of
Listeria ivanovii HPB28 as efficiently as when lactic acid, citric acid and
pediocin are
combined (Mix I). The compositions could thus have a synergistic effect on the
growth of both Gram-positive and Gram-negative bacteria.
Furthermore, as demonstrated at figures 3A and 3B, between 2 and 4 log
reduction
of E. coli ATCC 11229 growth is observed upon contacting the bacteria with two
acids and pediocin or reuterin (Mix I or II) for 15 minutes at a concentration
of 10X
MIC. An 8 log reduction of E. coli ATCC 11229 growth is observed after only 30
or
10 60 seconds of contacting the bacteria with these compositions at a
concentration of
100X MIC. A 8 log reduction of S. aureus ATCC 6538 growth is observed after 30
or
60 seconds when these compositions are used at a concentration of 100X MIC
(figures 4A and 4B). As such, the compositions could have a synergistic action
against Gram-positive and Gram-negative bacteria and have a large spectrum of
antimicrobial activity.
In an embodiment, the composition identified as Mix I (citric and lactic acids
and
pediocin) comprises citric acid in an amount from about 0.20 to 20 % by weight
or
volume, lactic acid in an amount from about 0.10 to 10 % by weight or volume
and
pediocin in an amount from about 40 to 4000 AU/ml. For example the composition
could comprise 0.33, 3.3, 6.6, 13.2, 19.8, % by weight or volume of citric
acid, 0.125,
1.25, 2.5, 5, 7.5 and 10 % by weight or volume of lactic acid and 40, 400,
800, 1600,
2400, 3200 and 4000 AU/ml of pediocin.
In another embodiment, Mix I comprises citric acid in an amount of about 0.20
% by
weight or volume, lactic acid in an amount of about 0.10 % by weight or volume
and
pediocin in an amount of about 40 AU/ml.
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In another embodiment, Mix I comprises citric acid in an amount of about 20 %
by
weight or volume, lactic acid in an amount of about 10 % by weight or volume
and
pediocin in an amount of about 4000 AU/ml.
In one embodiment, the composition identified as Mix II (citric and lactic
acids and
reuterin) comprises citric acid in an amount from about 0.2 to 20 % by weight
or
volume, lactic acid in an amount from about 0.10 to 10 % by weight or volume
and
reuterin in an amount from about 1.28 to 128 AU/ml. For example the
composition
could comprise 0.33, 3.3, 6.6, 13.2, 19.8, % by weight or volume of citric
acid, 0.125,
1.25, 2.5, 5, 7.5 and 10 % by weight or volume of lactic acid and 1.28, 12.8,
25.6,
51.2, 76.8, 102.4, and 128 AU/ml of reuterin.
In another embodiment, Mix II comprises citric acid in an amount of about 0.2
% by
weight or volume, lactic acid in an amount of about 0.10 % by weight or volume
and
reuterin in an amount of about 1.28 AU/ml.
In another embodiment, Mix II comprises citric acid in an amount of about 20 %
by
weight or volume, lactic acid in an amount of about 10 % by weight or volume
and
reuterin in an amount of about 128 AU/ml.
As shown at figure 5, acetic and lactic acids, pediocin and reuterin
individually do not
inhibit E. Co/i ATCC 11229 bacterial growth as efficiently as Mix I (citric
and lactic
acids and pediocin) and Mix II (citric and lactic acids and reuterin). Similar
results
can be observed at figure 6 wherein Mix I (citric and lactic acids and
pediocin) as
well as Mix II (citric and lactic acids and reuterin) inhibit Listeria
ivanovii HBP 28
bacterial growth.
The scope of the claims should not be limited by the specific embodiments set
forth
in the examples, but should be given the broadest interpretation consistent
with the
description as a whole.
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Materials and Methods
1. Target bacterial strains, media and growth conditions
The following bacterial strains were used:
Strain Source Medium
Growth Temp (t)
Pediococcus acidilactici Paul&Fliss Int. MRS 30
Lactobacillus reuteri ATCC 53608 MRS 37
Escherichia coli ATCC 11229 TSB 37
Escherichia coli MC 4100 La Rochelle TSB 37
Listeria ivanovii HPB 28 TSB 30
Staphylococcus aureus subsp. aureus ATCC 6538 TSB 37
Pseudomonas aeruginosa ATCC 15442 TSB 37
Salmonella enterica ATCC 14028 TSB 37
Enterococcus faecalis ATCC 27275 TSB 37
Listeria monocyto genes LSD 532 TSB 30
Listeria monocyto genes LMA 1045 Laval U TSB 30
All strains were maintained in 20% glycerol at -80 C. Strains were reactivated
by at
least three 24-h sub-cultures in the appropriate medium to obtain stock
culture for
experiments.
2. Natural Antimicrobial compounds
Fresh pediocin extract was prepared according to known methods and for
instance
as described by (Naghmouchi et al. 2008).
Fresh reuterin extract was prepared from overnight culture of Lactobacillus
reuteri
available from ATCC as described by Vollenweider et al. 2004.
Acetic, citric, lactic and acids were used. Acetic acid was purchased from
Sigma-
Aldrich, Ontario, Canada and the others were obtained from Laboratoire MAT,
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Quebec City, Canada. The following table summarizes the characteristics of
these
organic acids.
Compound Acetic acid Citric acid Lactic acid
Formula C2H402 C6H807 C3H603
pH at 20`C 2.4
pH at 20 A 1.89 1.89
Molar mass (g/mol) 60.05 192.12 90.08
Density p (g/mL) 1.049 powder 1.209
at 25cC
Purity of commercial 100% 100% 88%
preparation
Molarity at 20% 3.33 1.04 2.22
mass/volume
3. Microplate microdilution method
The inhibitory activity of the various antimicrobial compounds alone or in
combination was assayed using the microtiter plate critical dilution method
with two-
fold serial dilutions in TSB (Turcotte et al., 2004). The 100-pL carry-over
volume was
drawn into the multi-channel pipette four times between each dilution. Wells
were
then seeded with 40 pL of target strain overnight culture diluted 1,000 fold.
The
plates (MIC-2000 U-Bottom Microtiter Plates; Thermo Labsystems, Franklin, MA,
USA) were incubated at 30cC for 18h before reading the optical density at 650
nm
using a Thermomax microplate reader (Molecular Devices, Opti-Resources,
Charny,
QC, Canada).
One arbitrary unit (AU) was defined as a 100-pL portion of the highest
dilution of
tested sample that inhibited growth in a well after 18h of incubation (Daba et
al,
1993). A well was considered positive (significant inhibition) when the
optical density
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of the well was less than the half of the optical density of the positive
control. The
number of AU per ml is thus 20n, where n = number of inhibited wells.
4. MIC and FIC index determinations
The MIC of each antimicrobial compound was determined using polystyrene 96-
well
micro-test plates (Becton Dickinson Labware, Lincoln Park, New Jersey). A mid-
log-
phase culture of each sensitive strain was diluted 1/10,000 in fresh TSBYE to
provide an initial bacteria concentration of 1-5 x 105 CFU/well. Two-fold
serial
dilutions of each antimicrobial compound were made by carrying over 100 pL in
micro-plate wells pre-filled with 100 pL of TSYEB. Each well then received 25
pL of
diluted culture as described by Mota-Meira et al. 2000. The micro-plates were
incubated at 37cC for 16h and the optical density was read at 650 nm using a
micro-
plate reader. Control wells (inoculated with the tested culture without added
inhibitor)
and blank wells (containing un-inoculated broth with added inhibitor) were
included.
The MIC corresponds to the minimal inhibitory concentration of tested
inhibitor giving
complete inhibition of detectable growth (OD equal to OD of blank). The micro-
dilution assay was repeated three times and results were presented as the
median
of the three repetitions. The antimicrobial activity of different combinations
of
compounds against their target strains was measured by calculating the FIC
index
using the checkerboard method with 96-well polystyrene micro-plates. Briefly,
each
well containing 120 pL of TSBYE medium with two compounds (60 pL each)
received 120 pL of diluted bacterial suspension. The micro-plates were
incubated at
37cC for 18h and the optical density was measured a t 650 nm.
The FIC of an antimicrobial agent X is calculated as described by Schwalbe R
et al.
2007.
FIC(X) = MIC(X)in combination/MIC(X)alone
The FIC index of a combination of agents A and B is the sum of their FIC (FIC
index
= > FIC = FICA + FICB). The interaction is considered synergistic if the FIC
index
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is <0.5, moderate synergy if 0.5 < FIC index
1.0, indifferent if 1.0 < FIC index
4.0, and antagonistic if the FIC index > 4Ø
The FIC index determination was repeated independently three times as shown at
figures 9 to 14.
5. Agar diffusion test
The agar well diffusion method previously described by Tagg et al. 1976 was
applied
as a rapid method to detect the inhibitory activity of the compounds directly
(as a
solution) or after immobilization on paper towel. Briefly, 25 mL of sterile
TSB with
0.8% (w/v) agar was seeded with 150 pL of an overnight culture of one of the
target
10 sensitive strains and poured into a sterile Petri dish (Starstedt Inc.,
Montreal,
Canada). The Petri dishes were kept for 20 min at room temperature under
sterile
conditions to allow agar solidification. Wells 7 mm in diameter were then cut
in the
solidified agar using the wide end of a sterile 5-mL pipette. Each well was
filled with
80 pL of the compound or mixture to be tested. In the case of pre-soaked paper
towel, circles 1 cm in diameter were cut and deposited directly on the
solidified agar.
All plates were incubated at 30cC for 18h and the d iameter of the zone of
inhibition
was measured.
EXAMPLES
The inhibitory activity of the antimicrobial compounds was thus tested both in
20 solution and after immobilization on paper towel provided by Cascades.
Antimicrobial activity of the antimicrobial compound solutions: Tables 1, 2
and
figures 9 to 14 present the FIC index obtained for compounds exhibiting
significant
synergistic effects against E. coli ATCC 11229 and L. ivanovii HPB28. The
effects
are variable. The greatest synergistic effect against E. coli ATCC 11229 was
obtained for reuterin combined with lactic acid or citric acid (Table 1).
Using L.
ivanovii HPB28, all combinations containing pediocin, reuterin or Nisin were
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synergistic (Table 2 and figures 9 to 14). As can also be shown from figures
13 and
14, synergistic effects are observed when reuterin is combined with pediocin
or Nisin
Z. Based on these results and the MIC values obtained from screening tests
using
individual compounds two mixtures were formulated, the compositions of which
are
shown in Tables 3 and 4.
Table 1 Synergetic effects of selected natural compounds against E. coli ATCC
11229 based on FIC index calculation.
Citric acid Lactic acid Reuterin
Pediocin PA-1
Citric acid 0,75 0,5 1
Lactic acid 0,75 0,5 0,75
Reuterin 0,5 0,5 0,75
Pediocin PA-
1 0,75 0,75
1
Table 2 Synergetic effects of selected natural compounds against Listeria
ivanovii
HPB28 based on FIC index calculation.
Citric acid Lactic acid Reuterin
Pediocin PA-1
Citric acid 0,75 0,75
Lactic acid 0,75 0,75 0,75
Reuterin 0,625 0,75 0,75
Pediocin PA-
0,75 0,75 0,75
1
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Table 3 Final concentration of Mix I and II determined on the inhibition
activities and
FIC indexes obtained with different inhibition compounds (in liquid form).
Mix I Final Mix ll Final
Citric acid 0.2% 0.2 %
Lactic acid 0.1% 0.1%
Reuterin 1% (1.28 AU/ml)
Pediocin 0.1% (40 AU/ml)
The synergism of these mixtures against E. coli ATCC 11229 and L. ivanovii
HPB28
was confirmed based on the growth curves obtained in the presence of the
antimicrobial compounds either alone or in combination. For example, as shown
in
figures 1A and 1B, inhibition of both E. coli ATCC 11229 and L. ivanovii HPB
28 was
total with the citric acid, lactic acid and reuterin (Mix II). Only a partial
and non-
significant inhibition was observed when the three active compounds were each
used alone at concentrations of 0.25%, 0.25% and 1.25% respectively. Similar
results were obtained with Mix I with reuterin replaced by pediocin (figure
2).
Figures 7A and 7B show the growth kinetics of E. coli ATCC 11229 as a function
of
the concentration of Mix I and II, expressed in terms of MIC. Inhibition of E.
coli
ATCC 11229 was total at 5 times the MIC. At a concentration equivalent to
0.625
MIC, inhibition lasted 14 hours only for Mix II, while lower concentrations
were not
inhibitory. In the case of L. ivanovii HPB28, total inhibition was observed at
1.25
times MIC for Mix I and II and no inhibition was observed with concentrations
of 0.3
times or less (figures 8A and 8B).
The inhibitory activity of the antimicrobial compounds was thus tested both in
solution and after soaking on paper towel provided by Cascades.
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2. Antimicrobial activity of paper towel pre-soaked with the mixtures
The aim of this experiment was to study the inhibition of bacterial growth by
the
antimicrobial Mix I and II in association with paper towels. This was of
course based
on the assumption that the active compounds would diffuse from the towels. Mix
I
and II were tested at 1, 10 and 100 times the MIC shown in Tables 3. As shown
at
figures 5 and 6, significant inhibition (indicated by the clear inhibition
zone around
the paper) was obtained for both Mix at 100 times the MIC, against both E.
coli
ATCC 11229 and L. ivanovii HPB28. Inhibition of Listeria was significantly
stronger
with Mix I, which contains pediocin (figure 6A). On the other hand, no clear
inhibition
of any strain was observed at 10 times the MIC, even though this concentration
was
effective in the agar diffusion test. This is surprising since 8-log reduction
of E. coli
ATCC 11229 (figures 3A and 3B) and S. aureus ATCC 6538 (figures 4A and 4B)
was obtained with both Mix at 100 times MIC after only 15 seconds of contact
time
between the bacteria and the Mix using AOAC 960.09 method (AOAC 2000). Similar
results were obtained with L. monocytogenes, E. faecalis and S. enterica. At
10
times MIC, between 0.5-log and 5-log reductions was observed with a contact
time
of 15 minutes between the bacteria and the Mix, while no inhibition was
observed
with shorter contact times. At 1X MIC, no inhibition was obtained with a
contact time
of 15 minutes. The final compositions of Mix I and II, based on the results
described
above, are presented in Table 4.
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Table 4 Final concentration of Mix I and II determined on the inhibition
activities with
different pre-soaked towel paper.
Mix I Final Mix ll Final
Citric acid 20% 20%
Lactic acid 10% 10%
Reuterin - 128 AU/m I
Pediocin 4000 AU/m I -
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References
Said Ennahar, Toshihiro Sashihara, Kenji Sonomoto, Ayaaki Ishizaki 2000. Class
ha
bacteriocins: biosynthesis, structure and activity. FEMS Microbiology Reviews
Volume 24, Issue 1, pages 85-106, January 2000.
Hammami R, Zouhir A, Le Lay C, Ben Hamida J, Fliss I. BACTIBASE second
release: a database and tool platform for bacteriocin characterization. BMC
Microbiol. 2010 Jan 27;10:22. PubMed PMID: 20105292.
Hammami R, Zouhir A, Ben Hamida J, Fliss I. BACTIBASE: a new web-accessible
database for bacteriocin characterization. BMC Microbiol. 2007 Oct 17;7:89.
10 Turcotte C, Lacroix C, Kheadr E, Grignon L, Fliss I. A rapid
turbidometric microplate
bioassay for accurate quantification of lactic acid bacteria bacteriocins. Int
J Food
Microbiol. 2004 Feb 1;90(3):283-93.
Benech RO, Kheadr EE, Lacroix C, Fliss I. Antibacterial activities of nisin Z
encapsulated in liposomes or produced in situ by mixed culture during cheddar
cheese ripening. Appl Environ Microbiol. 2002 Nov;68(11):5607-19.
Mota-Meira M, LaPointe G, Lacroix C, Lavoie MC. MICs of mutacin B-Ny266, nisin
A, vancomycin, and oxacillin against bacterial pathogens. Antimicrob Agents
Chemother. 2000 Jan;44(1):24-9. Barchiesi et al (2001).
Daba, Hocine; Lacroix, Christophe; Huang, Jun. 1993. Influence of growth
conditions
20 on production and activity of mesenterocin 5 by a strain of Leuconostoc
mesenteroides Applied Microbiology and Biotechnology (1993) 39: 166-173.
Tagg JR, Dajani AS, Wannamaker LW. 1976. Bacteriocins of gram-positive
bacteria.
Bacteriol. Rev 40:722-56.
CA 02868288 2014-09-23
WO 2013/155624
PCT/CA2013/050290
26
Vollenweider S, Lacroix C: 2004. 3-hydroxypropionaldehyde: applications and
perspectives of biotechnological production. App! Microbiol
Biotechno1.64(1):16-27.
Benebank. Nucleic Acids Research , 2011 Jan;39(Database issue):D32-. 7 AOAC
International. 2000. AOAC official method 960.09. Germicidal and detergent
sanitizing action of disinfectants.
Naghmouchi K, Fliss I, Drider D, Lacroix C. 2008. Pediocin PA-1 production
during
repeated-cycle batch culture of immobilized Pediococcus acidilactici UL5
cells. J
Biosci Bioeng. 105(5):513-7.
Antimicrobial Susceptibility Testing Protocols. 2007. Kindle Edition Richard
Schwalbe (Editor), Lynn Steele-Moore (Editor), Avery C. Goodwin (Editor) CRC
Press, NY, usa.
Abee T., 1995. Pore-forming bacteriocins of Gram + bacteria and self-
protection
mechanisms of producer organisms. FEMS Microbiol. Lett., 129, 1-9.
Cutter, C. N., J. L. Willett, and G. R Siragusa. 2001. Improved antimicrobial
activity
of nisin-incorporated polymer films by formulation change and addition of food
grade
chelator. Lett. Appl. Microbiol. 33:325-328.
Allende et al. Growth and bacteriocin production by lactic acid bacteria in
vegetable
broth and their effectiveness at reducing. 2007. Food Microbiology, 24, 7: 759-
766.
Nilsson L, Nielsen MK, Ng Y, Gram L. 2002. Role of acetate in production of an
autoinducible class Ila bacteriocin in Carnobacterium piscicola A9b. Appl
Environ
Microbiol. 68, 5:2251-60.