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Patent 2321965 Summary

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(12) Patent Application: (11) CA 2321965
(54) English Title: METHOD OF PRODUCING PLANTS WHICH ARE TOLERANT OR RESISTANT TO HERBICIDES
(54) French Title: PROCEDE DE PRODUCTION DE PLANTES TOLERANTES OU RESISTANTES AUX HERBICIDES
Status: Dead
Bibliographic Data
(51) International Patent Classification (IPC):
  • C12N 15/82 (2006.01)
  • A01H 5/00 (2006.01)
  • A01H 5/10 (2006.01)
  • C12N 9/02 (2006.01)
  • C12N 15/53 (2006.01)
(72) Inventors :
  • SHIPTON, CATHERINE ANN (United Kingdom)
  • BRYAN, IAN BENNETT (United Kingdom)
(73) Owners :
  • ZENECA LIMITED (United Kingdom)
(71) Applicants :
  • ZENECA LIMITED (United Kingdom)
(74) Agent: NA
(74) Associate agent: NA
(45) Issued:
(86) PCT Filing Date: 1999-04-07
(87) Open to Public Inspection: 1999-10-21
Availability of licence: N/A
(25) Language of filing: English

Patent Cooperation Treaty (PCT): Yes
(86) PCT Filing Number: PCT/GB1999/001059
(87) International Publication Number: WO1999/053081
(85) National Entry: 2000-08-28

(30) Application Priority Data:
Application No. Country/Territory Date
9807818.1 United Kingdom 1998-04-09

Abstracts

English Abstract




A method of making plants which are resistant or tolerant to herbicides which,
in vitro, inhibit 4-hydroxyphenylpyruvate dioxygenase (4HPPD) comprises the
steps of: (i) transforming plant material with a polynucleotide comprising a
region encoding a phytoene desaturase; (ii) regenerating the thus transformed
material into morphologically normal plants. In a preferred embodiment the
region comprised by the polynucleotide is the sequence depicted in SEQ ID
No.1, or is a sequence which is complementary to one which when incubated at a
temperature of between 55 and 60 ~C in 0.3 strength citrate buffered saline
containing 0.1 % SDS followed by rinsing at the same temperature with 0.3
strength citrate buffered saline containing 0.1 % SDS still hybridises with
the sequence depicted in SEQ ID No.1.


French Abstract

L'invention concerne un procédé de production de plantes tolérantes ou résistantes aux herbicides et qui, in vitro, inhibent 4-hydroxyphénylpyruvate-dioxygénase (4HPPD). Le procédé consiste à i) transformer un matériel végétal comprenant un polynucléotide dont une région code un phytoène-désaturase; ii) régénérer le matériel ainsi transformé en plantes à morphologie normale. Dans une forme de réalisation préférée, cette région incluse dans le polynucléotide représente la séquence décrite dans SEQ ID No.1 ou est une séquence complémentaire à une autre séquence qui, une fois incubée à une température comprise entre 55 et 60 ·C dans un soluté tampon de citrate d'une teneur de 0,3 contenant 0,1 % de SDS et après rinçage dans les mêmes conditions, s'hybride toujours avec ladite séquence décrite dans SEQ ID No.1.

Claims

Note: Claims are shown in the official language in which they were submitted.




-10-


CLAIMS



1. A method of making plants which are resistant or tolerant to herbicides
which - in
vitro - inhibit 4-hydroxyphenylpyruvate dioxygenase (4HPPD) comprising the
steps
of:
(i) transforming plant material with a polynucleotide comprising a region
encoding a
phytoene desaturase (PDS);
(ii) regenerating the thus transformed material into morphologically normal
plants and
selecting from the population of regenerants those plants which are resistant
or
tolerant to herbicides which in vitro inhibit 4HPPD.
2. A method according to claim 1, wherein the region comprised by the
polynucleotide
is the sequence depicted in SEQ ID No. 1, or is a sequence which is
complementary
to one which when incubated at a temperature of between 55 and 60°C in
0.3 strength
citrate buffered saline containing 0.1 % SDS followed by rinsing at the same
temperature with 0.3 strength citrate buffered saline containing 0.1% SDS
still
hybridises with the sequence depicted in SEQ ID No. 1.
3. A method according to claim 1, wherein the phytoene desaturase is of plant
origin.
4. A method according to claim 1, wherein the phytoene desaturase is of
bacterial
origin.
A method according to claim 4 wherein the phytoene desaturase is isolatable
from
Erwinia uredovora.
6. A method according to any one of claims 1 to 5 wherein the polynucleotide
further
comprises a selectable marker gene.



-11-



7. A method according to claim 6 wherein the said selectable marker gene is
selected
from the group consisting of antibiotic resistance conferring, herbicide
resistance
conferring, toxin resistance conferring, nutritional markers, visual markers
and
marker genes used in hormone based selection systems.
8. A method according to any one of claims 1 to 7, wherein the plant material
has been
or is further transformed with a polynucleotide comprising a region encoding a
protein capable of providing the plant material with resistance or tolerance
to
herbicides, insects, desiccation and/or fungal, bacterial or viral infections,
or with a
polynucleotide capable of encoding proteins which provide for improved quality
traits such as increased yield, altered starch quality and/or increased
nutrient content.
9. A method according to any one of claims 1 to 8, wherein the protein
encoding
sequences within the polynucleotide are bounded by plant operable promoters
and
terminators.
10. A method according to either of claims 8 or 9, wherein the protein capable
of
providing for herbicide resistance is selected from the group consisting of
glyphosate
oxido-reductase (GOX), 5-enol-pyruvyl-3-phosphoshikimate synthetase (EPSPS),
phosphinothricin acetyl transferase (PAT), hydroxyphenyl pyruvate dioxygenase
(HPPD), glutathione S transferase (GST), cytochrome P450, Acetyl-COA
carboxylase (ACCase), Acetolactate synthase (ALS), protoporphyrinogen oxidase
(PROTON, dihydropteroate synthase, polyamine transport proteins, superoxide
dismutase (SOD), bromoxynil nitrilase, the product of the tfdA gene obtainable
from
Alcaligenes eutrophus, farnesyl pyrophosphate synthase and known mutagenised
or
otherwise modified variants of the said proteins.



-12-



11. A method according to any one of claims 1 to 10, wherein the protein
encoding
sequences of the polynucleotide comprise 5' regions which encode: (i) a
peptide
which is capable of targeting the translation products of the regions to
plastids such as
chloroplasts, mitochondria, other organelles or plant cell walls; and/or (ii)
non-translated translational enhancing sequences.
12. A method according to any one of claims 1 to 11, in which the
polynucleotide used to
transform the material is modified in that mRNA instability encoding motifs
and/or
fortuitous splice regions are removed, or plant preferred codons are used so
that
expression of the thus modified polynucleotide in a plant yields substantially
similar
protein having a substantially similar activity/function to that obtained by
expression
of the unmodified polynucleotide in the organism in which the protein encoding
regions of the unmodified polynucleotide are endogenous, with the proviso that
if
in respect of the herbicide resistance conferring regions - the thus modified
polynucleotide comprises plant preferred codons, the degree of identity
between the
protein encoding regions within the modified polynucleotide and like protein
encoding regions endogenously contained within the said plant and encoding
substantially the same protein is less than about 70%.
13. A method according to any one of claims 1 to 12, in which the 4-HPPD
inhibiting
herbicide is selected from the group consisting of isoxaflutole,
diketonitriles such as
2-cyano-3-cyclopropyl-1-(2-SO2CH3-4-CF3-phenyl)propane-1,3-dione and
2-cyano-3-cyclopropyl-1-(2-SO2CH3-4-2,3Cl2phenyl)propane-1,3-dione, triketones
such as
sulcotrione, and mesotrione (BSI-proposed), pyrazolynate and pyrazoxyfen.
14. A method according to any one of claims 1 to 13, wherein the herbicide is
applied
post-germination.
15. A morphologically normal fertile (or male sterile) whole plant resulting
from the
method of any one of claims 1 to 14, the progeny of such plants, the seed of
such
plants and progeny, and parts of such plants and progeny.



-13-


16. A plant according to claim 15 selected from the group consisting of
banana, cotton,
maize, tomato, vines.
17. Use of a polynucleotide comprising a region encoding a phytoene desaturase
in the
production of plant material which is resistant or tolerant to herbicides
which - in
vitro - inhibit the enzyme 4-HPPD.
18. A method of selectively controlling weeds in a field, the field comprising
weeds and
crop plants, the method comprising application to the field of a herbicide
which - in
vitro - is capable of inhibiting the enzyme 4-HPPD, characterised in that the
plants
have been transformed with and express the coding regions of a polynucleotide
comprising a sequence encoding a phytoene desaturase.
19. A method according to claim 18 wherein the polynucleotide is that
mentioned in any
one of claims 2 to 12.
20. A method according to either of claims 18 or 19, wherein the said
herbicide is
selected from the group consisting of, isoxaflutole, diketonitriles such as
2-cyano-3-cyclopropyl-1-(2-SO2CH3-4-CF3-phenyl)propane-1,3-dione and
2-cyano-3-cyclopropyl-1-(2-SO2CH3-4-2,3Cl2phenyl)propane-1,3-dione, triketones
such as
sulcotrione, and mesotrione (BSI-proposed), pyrazolynate and pyrazoxyfen.
21. A method according to any one of claims 18 to 20, wherein the field is
treated with a
pesticide selected from the group consisting of a fungicide, insecticide and
nematicide, either prior to or post application to the field of the herbicide.

Description

Note: Descriptions are shown in the official language in which they were submitted.



CA 02321965 2000-08-28
WO 99/53081 PCT/GB99/01059
-I-
METHOD OF PRODUCING PLANTS WHICH ARE TOLERANT OR RESISTANT TO
HERBICIDES
The present invention relates inter alia, to a method of producing plants
which are
tolerant or resistant to herbicides and in particular to the production of
transgenic plants
which exhibit substantial resistance or substantial tolerance to herbicides
when compared
with non transgenic like plants.
Plants which are substantially "tolerant" to a herbicide when they are
subjected to it provide
a dose/response curve which is shifted to the right when compared with that
provided by
to similarly subjected non tolerant like plants. Such dose/response curves
have "dose" plotted
on the x-axis and "percentage kill", "herbicidal effect" etc. plotted on the y-
axis. Tolerant
plants will require more herbicide than non tolerant like plants in order to
produce a given
herbicidal effect. Plants which are substantially "resistant" to the herbicide
exhibit few, if
any, necrotic, lytic, chlorotic or other lesions when subjected to the
herbicide at
concentrations and rates which are typically employed by the agrochemical
community to
kill weeds in the field. Plants which are resistant to a herbicide are also
tolerant of the
herbicide. The terms "resistant" and "tolerant" are to be construed as
"tolerant and/or
resistant" within the context of the present application.
The herbicides of particular relevance to the present invention are those
which are
2o capable in vitro of inhibiting 4-Hydroxy-phenylpyruvate dioxygenase (HPPD
or 4HPPD)
enzymes. Such herbicides have been disclosed, such as the isoxazoles described
especially in
the French Patent Applications 95 06800 and 95 13570 and especially
isoxaflutole, a
selective maize herbicide, diketonitriles such as those described in European
Applications 0
496 630, 0496 631, in particular 2-cyano-3-cyclopropyl-1-(2-SOZCH3-4-CF3-
phenyl)propane-1,3-dione and 2-cyano-3-cyclopropyl-1-(2-SOZCH3-4-
2,3Cl2phenyl)propane-
1,3-dione, triketones described in European Applications 0 625 505 and 0 625
508, in
particular sulcotrione, mesotrione (BSI-proposed), pyrazolynate and
pyrazoxyfen. Known
genes capable of providing for tolerance to these herbicides are those which
encode HPPD
enzymes.


CA 02321965 2000-08-28
WO 99/53081 PCT/GB99/01059
_2_
According to the present invention there is provided a method of making plants
which are resistant or tolerant to herbicides which - in vitro - inhibit 4-
hydroxyphenylpyruvate dioxygenase (4HPPD) comprising the steps of:
(i) transforming plant material with a polynucleotide comprising a region
encoding a
phytoene desaturase {PDS);
(ii) regenerating the thus transformed material into morphologically normal
plants.
The region comprised by the polynucleotide may have the sequence depicted in
SEQ ID No.
1, or may be a sequence which is complementary to one which when incubated at
a
temperature of between 55 and 60°C in 0.3 strength citrate buffered
saline containing 0.1%
SDS followed by rinsing at the same temperature with 0.3 strength citrate
buffered saline
containing 0.1% SDS still hybridises with the sequence depicted in SEQ ID No.
1.
It is preferred that the phytoene desaturase is of bacterial origin such as
that depicted in SEQ
ID No. 1 and being derived from Erwinia uredovora, and/or in particular is one
which does
not require plastoquinone 9 as a co-factor. The desaturase may, however be of
plant origin,
such as especially of monocotyledonous or dicotyledonous plants, especially of
Arabidopsis
or of Umbelliferae, such as, for example, the carrot (Daucus carotta). It can
be native or
possibly mutated while at the same time fundamentally retaining a property of
herbicidal
tolerance against HPPD inhibitors, such as herbicides of the isoxazoles family
such as the
Balance T"'' Herbicide or triketones. The herbicide resistant plants produced
by the above
2o method may be selected through their resistance to herbicides which in
vitro, inhibit 4HPPD.
In may however, be further preferred that the polynucleotide encoding the
phytoene
desaturase further comprises a selectable marker gene to facilitate the
selection of
regenerated transformats. Suitable selectable marker genes include; resistance
to antibiotics
such as kanamycin, hygromycin and gentamycin; resistance to further herbicides
such as
glyphosate based herbicides; resistance to toxins such as eutypine.
Other forms of selection are also available such as hormone based selection
systems such as
the Multi Auto Transformation (MAT) system of Hiroyrasu Ebinuma et al. 1997.
PNAS Vol.
94 pp2117-2121; visual selection systems which use the known green
flourescence protein, (3
glucoronidase, mannose isomerase, xylose isomerase and 2-DOG.
3o The plant material may be, or may have been, further transformed with a
polynucleotide
comprising a region encoding a protein capable of providing the plant material
with


CA 02321965 2000-08-28
WO 99/53081 PCT/GB99/01059
-3-
resistance or tolerance to herbicides, insects, desiccation and/or fungal,
bacterial or viral
infections, or with a polynucleotide capable of encoding proteins which
provide for
improved quality traits such as increased yield, altered starch quality and/or
increased
nutrient content.
The protein encoding sequences within the polynucleotide are bounded by plant
operable promoters and terminators. Such promoters and terminators, which are
per se not
germane to the invention, are well known to the skilled man and include, for
example, the
CaMV35S, FMV35S, NOS, OCS and E9 (derived from the small subunit of RUBISCO)
promoters and terminators, or the promoter and terminator of a gene of alpha-
tubulin (EP-A
652,286). Preferably, recourse is made to a promoter regulation sequence which
favours the
over-expression of the coding sequence, such as, for example, that comprising
at least one
histone promoter such as described in EP-A-507,698.
According to the invention, it is equally possible to use, in association with
the
promoter regulation sequence, other regulation sequences which are situated
between the
promoter and the coding sequence, such as transcriptional or translational
enhancers such as,
for example, tobacco etch virus (TEV) translation activator described in
International Patent
application, PCT publication number W087/07644 which is incorporated herein by
reference, or of transit peptides, either single, or double, and in this case
possibly separated
by an intermediate sequence, that is to say comprising, in the transcription
direction, a
2o sequence coding for a transit peptide of a plant gene coding for a plastid
localization enzyme,
a part of the sequence of the N-terminal mature part of a plant gene coding
for a plastid
localization enzyme, then a sequence coding for a second transit peptide of a
plant gene
coding for a plastid localization enzyme, formed by a part of the sequence of
the N-terminal
mature part of a plant gene coding for a plastid localization enzyme, such as
described in EP-
A-508,909.
The plant material may have been, or may subsequently be - further transformed
with
a polynucleotide comprising a region encoding a protein capable of providing
the plant with
resistance or tolerance to herbicides, insects, desiccation and/or fungal,
bacterial or viral
infections, or with a polynucleotide capable of encoding proteins which
provide for
3o improved quality traits such as increased yield, altered starch quality
and/or increased
nutrient content.


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WO 99/53081 PCT/GB99/01059
-4-
The protein capable of providing for herbicide resistance may be selected from
the
group consisting of glyphosate oxido-reductase (GOX), 5-enol-pyruvyl-3-
phosphoshikimate
synthetase (EPSPS), phosphinothricin acetyl transferase (PAT), hydroxyphenyl
pyruvate
dioxygenase (HPPD), glutathione S transferase (GST), cytochrome P450, Acetyl-
COA
carboxylase (ACCase), Acetolactate synthase (ALS), protoporphyrinogen oxidase
(PROTOX), dihydropteroate synthase, polyamine transport proteins, superoxide
dismutase
(SOD), bromoxynil nitrilase, the product of the tfdA gene obtainable from
Alcaligenes
eutrophus, and known mutagenised or otherwise modified variants of the said
proteins.
As indicated above, the polynucleotide with which the plant material may be
t o transformed may comprise 5' of the protein encoding regions regions which
encode: (i) a
peptide which is capable of targeting the translation products of the regions
to plastids such
as chloroplasts, mitochondria, other organelles or plant cell walls; and/or
(ii) non-translated
translational enhancing sequences.
The polynucleotide may be codon-optimised, or otherwise altered to enhance at
least
transcription once it is incorporated into plant material. Thus the
polynucleotide used to
transform the material may be modified in that mRNA instability encoding
motifs and/or
fortuitous splice regions may be removed, or plant preferred codons may be
used so that
expression of the thus modified polynucleotide in a plant yields substantially
similar protein
having a substantially similar activity/function to that obtained by
expression of the
2o unmodified polyriucleotide in the organism in which the protein encoding
regions of the
unmodified polynucleotide are endogenous, with the proviso that if - in
respect of the
herbicide resistance conferring regions - the thus modified polynucleotide
comprises plant
preferred codons, the degree of identity between the protein encoding regions
within the
modified polynucleotide and like protein encoding regions endogenously
contained within
the said plant and encoding substantially the same protein is less than about
70%.
Transformation techniques are well known and include particle mediated
biolistic
transformation, Agrobacterium-mediated transformation, protoplast
transformation
(optionally in the presence of polyethylene glycols); sonication of plant
tissues, cells or
protoplasts in a medium comprising the polynucleotide or vector; micro-
insertion of the
3o polynucleotide or vector into totipotent plant material (optionally
employing the known
silicon carbide "whiskers" technique), electroporation and the like.


CA 02321965 2000-08-28
WO 99/53081 PCT/GB99/01059
-5-
The invention still further provides morphologically normal fertile (or male
sterile) whole
plants regenerated from the material mentioned in the paragraph immediately
preceding the
last and the progeny of such plants, the seed of such plants and progeny, and
parts of such
plants and progeny. The transformed inventive plants include small grain
cereals, oil seed
crops, fibre plants, fruit, vegetables, plantation crops and trees.
Particularly preferred such
plants include soybean, cotton, tobacco, sugarbeet, oilseed rape, canola,
flax, sunflower, potato,
tomato, alfalfa, lettuce, maize, wheat, sorghum, rye, bananas, barley, oat,
turf grass, forage
grass, sugar cane, pea, field bean, rice, pine, poplar, apple, grape, citrus
and nut plants.
The transformed plants of the invention have tolerance or resistance to
certain
to herbicides such as the isoxazoles described especially in French Patent
Applications 9506800
and 95 13570 and especially of 4-[4-CF3-2-(methylsulphonyl)benzoyl]-5-
cyclopropylisoxazole, and especially isoxaflutole, a selective maize
herbicide, the
diketonitriles such as those described in EP-A-496,630 and EP-A-496,631, in
particular 2-
cyano-3-cyclopropyl-1-(2-SOZCH3-4-CF3-phenyl)propane-1,3-dione and 2-cyano-3-
cyclopropyl-1-(2-SOZCH3-4-2,3-C12-phenyl)propane-1,3-dione, and the triketones
described
in EP-A-625,505 and EP-A-625,508, in particular sulcotrione, mesotrione (BSI-
proposed),
pyrazolynate and pyrazoxyfen.
The invention further includes a morphologically normal fertile (or male
sterile)
whole plant resulting from the method of the invention, the progeny of such
plants, the seed
of such plants and progeny, and parts of such plants and progeny.
The invention still further provides the use of a polynucleotide comprising a
region
encoding a phytoene desaturase in the production of plant material which is
resistant or
tolerant to herbicides which - in vitro - inhibit the enzyme 4-HPPD.
The invention still further provides a method of selectively controlling weeds
in a
field, the field comprising weeds and crop plants, the method comprising
application to the
field of a herbicide which - in vitro - is capable of inhibiting the enzyme 4-
HPPD,
characterised in that the plants have been transformed with and express the
coding regions of
a polynucleotide comprising a sequence encoding a phytoene desaturase.
It is particularly preferred that the phytoene desaturase encoding sequence is
that
3o which is depicted in SEQ ID No. 1, or is complementary to one which when
incubated at a
temperature of between 55 and 60°C in 0.3 strength citrate buffered
saline containing 0.1


CA 02321965 2000-08-28
WO 99/53081 PCT/GB99/01059
-6-
SDS followed by rinsing at the same temperature with 0.3 strength citrate
buffered saline
containing 0.1 % SDS still hybridises with the sequence depicted in SEQ ID No.
1. The
herbicide may be selected from the group consisting of mesotrione (BSI-
proposed),
pyrazolynate and pyrazoxyfen, Balance, sulcotrione etc. The field may be
treated with a
pesticide selected from the group consisting of a fungicide, insecticide and
nematicide, either
prior to or post application to the field of the herbicide.
The invention will now be described by way of the following non-limiting
example,
figure and the Sequence Listing in which:
SEQ ID No. 1 is the sequence of the phytoene desaturase (dehydrogenase) gene
isolated from
t o Erwinia uredovora. The person skilled in the art will recognise that any
phytoene desaturase
gene may be used in the production of plants having resistance/tolerance to
the herbicides
described above.
SEQ ID No. 2 is the protein encoded by SEQ ID No 1.
SEQ ID No.3 is the polynucleotide sequence encoding the pea rubisco small
subunit transit
15 peptide.
SEQ IN No. 4 is the amino acid sequence encoded by SEQ ID No. 3.
Figure 1 is the structure of plasmid pYPEIT4 carrying the Erwinia uredovora
crtI gene with
the transit peptide sequence (depicted as TP) of the pea rubisco small
subunit.
EXAMPLE
Production of plants tolerant to herbicides capable of inhibiting the enzyme 4-
HPPD ire
vitro.
The PDS gene (crtI) was cloned from Erwinia uredovora, a non-green
phytopathogenic
bacterial rot, and over-expressed in transgenic tobacco and tomato using a
plasmid
containing the CaMV 35S promoter and a chloroplast transit peptide (pYPIET4)
(Misawa et
al., 1993). Homozygous tomato lines over-expressing the crtI gene were
obtained as were
tobacco plants containing the same construct.
Construction of nlasmid pYPIET4 carr~;~ the tp-crtlgene


CA 02321965 2000-08-28
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_7_
Recombinant DNA techniques were performed using standard methods. A DNA
sequence
coding for the transit peptide (TP) in the precursor of the ribulose-1,5-
bisphosphte
carboxylase (Rubisco) small subunit of pea was isolated from plasmid pSNIF83
(Schreier et
al., 1985) as a 204 by HindIII-Sphl fragment, whose Spgl site contains the tp
processing site.
Plasmid pCRT-1 (Fraser et al (1992) J.Biol.Chem 267 19891-19895) carrying the
intact
phytoene desaturase gene (crtI) of Erwinia uredovora was digested with BamHl
and
HindIII, and a 1.57 kb BamHl-HindIII fragment can-ying the truncated crtl gene
was isolated.
The above 204 by HindIII-Sphl TP fragment was ligated with a 76bp synthesized
fragment
which carries the reading frame from the cohesive end for the Sphl site
containing the crtl
initiation codon to that of the BamHl site, and with the 1.57 kb BamHl-HindIII
fragment.
The desired 1.84 kb Hindlll fragment carrying the tp-crtl chimeric gene was
isolated, filled in
with Klenow enzyme, and ligated into the Smal-Sacl site of a 10.9 kb fragment
removing the
(3-glucuronidase gene from the binary vector bB/121 (purchased from Clontech
laboratories).
Thus, the desired plasmid pYPEIT4 was created, shown in Figure 1. The
initiation codons
for the transit peptide and the intact Crtl are underlined. This HindIII
fragment carrying the
tp-crtI gene is surrounded by the CaMV 3 55 promoter and the NOS terminator of
the binary
vector pB1121 in order to lead to sufficient expression in the tissues of
transgenic tobacco
and tomato plants. As a control, plasmid pBICAR4 was constructed which carries
an intact
crtl gene without tp surrounded by the CaMV 355 promoter and the NOS
terminator. The
2o plasmid pYPEIT4 was introduced into tobacco and tomato material by known
techniques and
the material then regenerated into intact plants, again by known techniques.
Tolerance of Tomato Plants transformed with crtI gene to Mesotrione and
Isoxaflutole
Homozygous seed of tomato plants cv. Ailsa Craig, derived from 'wild type'
(i.e. un-
transformed) and plants transformed with the crtl gene from Erwinina
uredovora, (see
above) were sown in a peat-based compost in 3 inch pots and transferred to the
glasshouse.
Plants were grown at 20/16 degrees day/night temperature under a 16 hour
photoperiod for
approximately 4 weeks prior to post-emergence treatment of four replicates
with mesotrione
or isoxaflutole (Balance ~'~'' Herbicide) at the 3 leaf stage. The chemicals
were suspended in
water and applied, via a track sprayer at a spray volume of 200 litres per
hectare, at rates
ranging from 1 to 500 grammes active ingredient per hectare (g a.i./ha), as
shown in Table 1.


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_$_
The plants were left to grow for a further 25 days and then assessed visually
for herbicidal
damage compared to untreated 'control' plants. Typical phytotoxic symptoms
observed were
extreme chlorosis/bleaching and necrosis of leaves and new growth. The results
from this
test are given in Table 1 below where the '% Damage/Phytotoxicity' scores
represent the
mean of the visual assessment from each of the four treatment replicates.


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WO 99/53081 PCT/GB99/01059
-9-
Table 1
Chemical Rate ~ % Damage/Phytotoxicity


(g a.i./ha) (25 days after
treatment)


Wild Type Transformed


(Un-Transformed)(crtI )


Mesotrione 1 25 0


3 29 0


11 50 9


33 81 49


Isoxaflutole 1 11 2


(Balance''' S 15 4
)


15 19 6


SO 21 x


150 34 19


500 65 31


As can be seen, plants transformed with the crtI gene which expresses the
bacterial PDS from
Erwinia uredovora, demonstrate elevated tolerance to mesotrione and
isoxaflutole compared
to wild type, un-transformed tomatoes. For example, 11 g a.i./ha of mesotrione
caused 50%
phytotoxicity to wild type tomatoes but only 9% injury is observed in the
transformed
plants. Similarly, wild type plants are significantly more damaged by 500 g
a.i.lha of
isoxaflutole than those containing the crtI gene.
to The skilled man will recognise that the invention is not limited to that
described above. For
example, plants other than tomato and tobacco may be transformed with a gene
encoding a
PDS enzyme, whether derived from a bacterial source or otherwise.


CA 02321965 2000-08-28
WO 99/53081 PCT/GB99/01059
-1-
SEQUENCE LISTING
<110> ZENECA LIMITED
<120> METHOD OF PRODUCING PLANTS WHICH ARE TOLERANT OR
RESISTANT TO HERBICIDES
<130> PPD50336W0
<140>
<141>
<150> 9807818.1
<151> 1998-04-09
<160> 9
<170> PatentIn Ver. 2.0
<210> 1


<211> 1493


<212> DNA


<213> Erwin ia
uredovora


<220>


<221> CDS


<222> (15). .(1493)


<400> 1


taaagagcga ctacatgaaa ccaactacg gtaattggt gcaggcttcggt 50


MetLys ProThrThr ValIleGly AlaGlyPheGly


1 5 10


ggc ctg gca ctggcaatt cgtctacaa getgcgggg atccccgtctta 98


Gly Leu Ala LeuAlaIle ArgLeuGln AlaAlaGly IleProValLeu


15 20 25


ctg ctt gaa caacgtgat aaacccggc ggtcggget tatgtctacgag 146


Leu Leu Glu GlnArgAsp LysProGly GlyArgAla TyrValTyrGlu


30 35 40


gat cag ggg tttaccttt gatgcaggc ccgacggtt atcaccgatccc 194


Asp Gln Gly PheThrPhe AspAlaGly ProThrVal IleThrAspPro


45 50 55 60


agt gcc att gaagaactg tttgcactg gcaggaaaa cagttaaaagag 242


Ser Ala Ile GluGluLeu PheAlaLeu AlaGlyLys GlnLeuLysGlu


65 70 75


tat gtc gaa ctgctgccg gttacgccg ttttaccgc ctgtgttgggag 290


Tyr Val Glu LeuLeuPro ValThrPro PheTyrArg LeuCysTrpGlu


80 85 90


tca ggg aag gtctttaat tacgataac gatcaaacc cggctcgaagcg 338


Ser Gly Lys ValPheAsn TyrAspAsn AspGlnThr ArgLeuGluAla


i 95 100 105


cag att cag cag ttt aat ccc cgc gat gtc gaa ggt tat cgt cag ttt 386
Gln Ile Gln Gln Phe Asn Pro Arg Asp Val Glu Gly Tyr Arg Gln Phe
110 115 120 .
ctg gac tat tca cgc gcg gtg ttt aaa gaa ggc tat cta aag ctc ggt 434
Leu Asp Tyr Ser Arg Ala Val Phe Lys Glu Gly Tyr Leu Lys Leu Gly
125 130 135 140


CA 02321965 2000-08-28
WO 99/53081 PCT/GB99/01059
-2-
actgtccct tttttatcg ttcagagac atgcttcgcgcc gcacct caa 482


ThrValPro PheLeuSer PheArgAsp MetLeuArgAla AlaPro Gln


145 150 155


ctggcgaaa ctgcaggca tggagaagc gtttacagtaag gttgcc agt 530


LeuAlaLys LeuGlnAla TrpArgSer ValTyrSerLys ValAla Ser


160 165 170


tacatcgaa gatgaacat ctgcgccag gcgttttctttc cactcg ctg 578


TyrIleGlu AspGluHis LeuArgGln AlaPheSerPhe HisSer Leu


175 180 185


ttggtgggc ggcaatccc ttcgccacc tcatccatttat acgttg ata 626


LeuValGly GlyAsnPro PheAlaThr SerSerIleTyr ThrLeu Ile


190 195 200


cacgcgctg gagcgtgag tggggcgtc tggtttccgcgt ggcggc acc 674


HisAlaLeu GluArgGlu TrpGlyVal TrpPheProArg GlyGly Thr


205 210 215 220


ggcgcatta gttcagggg atgataaag ctgtttcaggat ctgggt ggc 722


GlyAlaLeu ValGlnGly MetIleLys LeuPheGlnAsp LeuGly Gly


225 230 235


gaagtcgtg ttaaacgcc agagtcagc catatggaaacg acagga aac 770


GluValVal LeuAsnAla ArgValSer HisMetGluThr ThrGly Asn


290 245 250


aagattgaa gccgtgcat ttagaggac ggtcgcaggttc ctgacg caa 818


LysIleGlu AlaValHis LeuGluAsp GlyArgArgPhe LeuThr Gln


255 260 265


gccgtcgcg tcaaatgca gatgtggtt catacctatcgc gacctg tta 866


AlaValAla SerAsnAla AspValVal HisThrTyrArg AspLeu Leu


270 275 280


agccagcac cctgccgcg gttaagcag tccaacaaactg cagact aag 914


SerGlnHis ProAlaAla ValLysGln SerAsnLysLeu GlnThr Lys


285 290 295 300


cgcatgagt aactctctg tttgtgctc tattttggtttg aatcac cat 962


ArgMetSer AsnSerLeu PheValLeu TyrPheGlyLeu AsnHis His


305 310 315


catgatcag ctcgcgcat cacacggtt tgtttcggcccg cgttac cgc 1010


HisAspGln LeuAlaHis HisThrVal CysPheGlyPro ArgTyr Arg


320 325 330


gagctgatt gacgaaatt tttaatcat gatggcctcgca gaggac ttc 1058


GluLeuIle AspGluIle PheAsnHis AspGlyLeuAla GluAsp Phe


335 340 345


tcactttat ctgcacgcg ccctgtgtc acggattcgtca ctggcg cct 1106


SerLeuTyr LeuHisAla ProCysVal ThrAspSerSer LeuAla Pro


350 355 360


gaaggttgc ggcagttac tatgtgttg gcgccggtgccg cattta ggc 1154


GluGlyCys GlySerTyr TyrValLeu AlaProValPro HisLeu Gly


365 370 375 380


accgcgaac ctcgactgg acggttgag gggccaaaacta cgcgac cgt 1202


ThrAlaAsn LeuAspTrp ThrValGlu GlyProLysLeu ArgAsp Arg


385 390 395


atttttgcg taccttgag cagcattac atgcctggctta cggagt cag 1250


IlePheAla TyrLeuGlu GlnHisTyr MetProGlyLeu ArgSer Gln




CA 02321965 2000-08-28
WO 99/53081 PCT/GB99/01059
-3-
400 405 410


ctggtc acgcaccggatg tttacgccg tttgatttt cgcgaccag ctt 1298


LeuVal ThrHisArgMet PheThrPro PheAspPhe ArgAsp'Gln Leu


415 920 425


aatgcc tatcatggctca gccttttct gtggagccc gttcttacc cag 1346


AsnAla TyrHisGlySer AlaPheSer ValGluPro ValLeuThr Gln


430 435 440


agcgcc tggtttcggccg cataaccgc gataaaacc attactaat ctc 1394


SerAla TrpPheArgPro HisAsnArg AspLysThr IleThrAsn Leu


495 950 455 460


tacctg gtcggcgcaggc acgcatccc ggcgcaggc attcctggc gtc 1442


TyrLeu ValGlyAlaGly ThrHisPro GlyAlaGly IleProGly Val


465 470 475


atcggc tcggcaaaagcg acagcaggt ttgatgctg gaggatctg att 1490


IleGly SerAlaLysAla ThrAlaGly LeuMetLeu GluAspLeu Ile


480 485 490


tga 1993
<210> 2
<211> 492
<212> PRT
<213> Erwinia uredovora
<900> 2
Met Lys Pro Thr Thr Val Ile Gly Ala Gly Phe Gly Gly Leu Ala Leu
1 5 10 15
Ala Ile Arg Leu Gln Ala Ala Gly Ile Pro Val Leu Leu Leu Glu Gln
20 25 30
Arg Asp Lys Pro Gly Gly Arg Ala Tyr Val Tyr Glu Asp Gln Gly Phe
35 40 95
Thr Phe Asp Ala Gly Pro Thr Val Ile Thr Asp Pro Ser Ala Ile Glu
50 55 60
Glu Leu Phe Ala Leu Ala Gly Lys Gln Leu Lys Glu Tyr Val Glu Leu
65 70 75 80
Leu Pro Val Thr Pro Phe Tyr Arg Leu Cys Trp Glu Ser Gly Lys Val
85 90 95
Phe Asn Tyr Asp Asn Asp Gln Thr Arg Leu Glu Ala Gln Ile Gln Gln
100 105 110
Phe Asn Pro Arg Asp Val Glu Gly Tyr Arg Gln Phe Leu Asp Tyr Ser
115 120 125
Arg Ala Val Phe Lys Glu Gly Tyr Leu Lys Leu Gly Thr Val Pro Phe
130 135 140
Leu Ser Phe Arg Asp Met Leu Arg Ala Ala Pro Gln Leu Ala Lys Leu
145 150 155 160
Gln Ala Trp Arg Ser Val Tyr Ser Lys Val Ala Ser Tyr Ile Glu Asp
165 170 175
Glu His Leu Arg Gln Ala Phe Ser Phe His Ser Leu Leu Val Gly Gly


CA 02321965 2000-08-28
WO 99/53081 PCT/GB99/01059
-4-
180 185 190
Asn Pro Phe Ala Thr Ser Ser Ile Tyr Thr Leu Ile His Ala Leu Glu
195 200 205
Arg Glu Trp Gly Val Trp Phe Pro Arg Gly Gly Thr Gly Ala Leu Val
210 215 220
Gln Gly Met Ile Lys Leu Phe Gln Asp Leu Gly Gly Glu Val Val Leu
225 230 235 240
Asn Ala Arg Val Ser His Met Glu Thr Thr Gly Asn Lys Ile Glu Ala
295 250 255
Val His Leu Glu Asp Gly Arg Arg Phe Leu Thr Gln Ala Val Ala Ser
260 265 270
Asn Ala Asp Val Val His Thr Tyr Arg Asp Leu Leu Ser Gln His Pro
275 280 285
Ala Ala Vai Lys Gln Ser Asn Lys Leu Gln Thr Lys Arg Met Ser Asn
290 295 300
Ser Leu Phe Val Leu Tyr Phe Gly Leu Asn His His His Asp Gln Leu
305 310 315 320
Ala His His Thr Val Cys Phe Gly Pro Arg Tyr Arg Glu Leu Ile Asp
325 330 335
Glu Ile Phe Asn His Asp Gly Leu Ala Glu Asp Phe Ser Leu Tyr Leu
340 345 350
His Ala Pro Cys Val Thr Asp Ser Ser Leu Ala Pro Glu Gly Cys Gly
355 360 365
Ser Tyr Tyr Val Leu Ala Pro Val Pro His Leu Gly Thr Ala Asn Leu
370 375 380
Asp Trp Thr Val Glu Gly Pro Lys Leu Arg Asp Arg Ile Phe Ala Tyr
385 390 395 400
Leu Glu Gln His Tyr Met Pro Gly Leu Arg Ser Gln Leu Val Thr His
905 410 415
Arg Met Phe Thr Pro Phe Asp Phe Arg Asp Gln Leu Asn Ala Tyr His
420 425 430
Gly Ser Ala Phe Ser Val Glu Pro Val Leu Thr Gln Ser Ala Trp Phe
435 940 445
Arg Pro His Asn Arg Asp Lys Thr Ile Thr Asn Leu Tyr Leu Val Gly
450 455 460
Ala Gly Thr His Pro Gly Ala Gly Ile Pro Gly Val Ile Gly Ser Ala
465 470 475 480
Lys Ala Thr Ala Gly Leu Met Leu Giu Asp Leu Ile
485 490
<210> 3
<211> 209
<212> DNA
<213> Pisum sativum
<220>


CA 02321965 2000-08-28
WO 99/53081 PCT/GB99/01059
-5-
<221>
CDS


<222>
(1)..(204)


<900>
3


atggettct atgatatcc tcttcgget gtgacaacagtc agccgt gcc 48


MetAlaSer MetIleSer SerSerAla ValThrThrVal SerArg Ala


1 5 10 15


tctaggggg caatccgcc gcagtgget ccattcggcggc ctcaaa tcc 96


SerArgGly GlnSerAla AlaValAla ProPheGlyGly LeuLys Ser


20 25 30


atgactgga ttcccagtg aagaaggtc aacactgacatt acttcc att 144


MetThrGly PheProVal LysLysVal AsnThrAspIle ThrSer Ile


35 40 45


acaagcaat ggtggaaga gtaaagtgc atgaaaccaact acggta att 192


ThrSerAsn GlyGlyArg ValLysCys MetLysProThr ThrVal Ile


50 55 60


ggtgcaggc ttc 204


GlyAlaGly Phe


65


<210> 4
<211> 68
<212> PRT
<213> Pisum sativum
<400> 4
Met Ala Ser Met Ile Ser Ser Ser Ala Val Thr Thr Val Ser Arg Ala
1 5 10 15
Ser Arg Gly Gln Ser Ala Ala Val Ala Pro Phe Gly Gly Leu Lys Ser
20 25 30
Met Thr Gly Phe Pro Val Lys Lys Val Asn Thr Asp Ile Thr Ser Ile
35 40 45
Thr Ser Asn Gly Gly Arg Val Lys Cys Met Lys Pro Thr Thr Val Ile
50 55 60
Gly Ala Gly Phe
65

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Administrative Status

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Administrative Status

Title Date
Forecasted Issue Date Unavailable
(86) PCT Filing Date 1999-04-07
(87) PCT Publication Date 1999-10-21
(85) National Entry 2000-08-28
Dead Application 2004-04-07

Abandonment History

Abandonment Date Reason Reinstatement Date
2003-04-07 FAILURE TO PAY APPLICATION MAINTENANCE FEE

Payment History

Fee Type Anniversary Year Due Date Amount Paid Paid Date
Application Fee $300.00 2000-08-28
Registration of a document - section 124 $100.00 2000-11-22
Maintenance Fee - Application - New Act 2 2001-04-09 $100.00 2001-03-15
Maintenance Fee - Application - New Act 3 2002-04-08 $100.00 2002-03-15
Owners on Record

Note: Records showing the ownership history in alphabetical order.

Current Owners on Record
ZENECA LIMITED
Past Owners on Record
BRYAN, IAN BENNETT
SHIPTON, CATHERINE ANN
Past Owners that do not appear in the "Owners on Record" listing will appear in other documentation within the application.
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Description 
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(yyyy-mm-dd) 
Number of pages   Size of Image (KB) 
Abstract 2000-08-28 1 57
Description 2000-08-28 14 651
Claims 2000-08-28 4 168
Drawings 2000-08-28 1 7
Cover Page 2000-12-05 1 47
Description 2000-11-23 14 666
Correspondence 2000-11-23 1 3
Assignment 2000-08-28 3 91
PCT 2000-08-28 10 362
Prosecution-Amendment 2000-11-17 1 46
Assignment 2000-11-22 3 93
Correspondence 2000-11-23 6 242
Correspondence 2005-06-16 1 13
Correspondence 2005-06-21 1 16
Correspondence 2005-06-08 3 133
Correspondence 2005-08-30 3 123

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